Title |
Aestuariibaculum scopimerae sp. nov., Isolated from the Globular Ghost Crab, Scopimera globosa |
Author |
Jae-Bong Lee1, Byung-Chun Kim2, Hyangmi Kim3, Kyung Sook Bae3, Jae-Hyeong Yang1, Young-Yull Chun1, Seong-Joon Park4, and Doo-Sang Park3* |
Address |
1Dokdo Fisheries Research Center, National Fisheries Research and Development Institute, Pohang 791-119, Republic of Korea, 2The Research Institute of Industrial Science, Hanyang University, Seoul 133-791, Republic of Korea, 3Microbiological Resources Center, KRIBB, Daejeon 305-806, Republic of Korea, 4National Institute of Environmental Research, Inchon 404-708, Republic of Korea |
Bibliography |
Journal of Microbiology, 51(6),736–740, 2013,
|
DOI |
10.1007/s12275-013-3499-5
|
Key Words |
Aestuariibaculum scopimerae, polyphasic analysis |
Abstract |
A Gram-staining-negative, non-motile, catalase- and oxidasepositive
bacterium, designated strain I-15T, was isolated
from a crab of the Yellow Sea, Korea. On the basis of a 16S
rRNA gene sequence analysis, strain I-15T was shown to
belong to Bacteroidetes, related to the genus Aestuariibaculum.
Sequence similarity between strain I-15T and the only type
strain of the genus Aestuariibaculum, Aestuariibaculum suncheonense
SC17T, was 96.7%. Strain I-15T grew at 0.5–6.0%
(w/v) NaCl, at 10–42°C and at pH 4.5–8.0. It could hydrolyze
starch and Tweens 80. Menaquinone-6 was the only respiratory
quinone, and summed features 3 (C16:1 ω7c/C16:1 ω6c)
(16.4%), iso-C15:0 (15.6%), and iso-C15:1 G (12.6%) were the
major cellular fatty acids. The major polar lipids were phosphatidylethanolamine,
two unidentified aminolipids and two
unidentified lipids. The DNA G+C content was 39.0 mol%.
Polyphasic data allowed genotypic and phenotypic distinction
of strain I-15T from the only validly published Aestuariibaculum
species. Therefore, the organism is considered a
novel species of the genus Aestuariibaculum, for which the
name Aestuariibaculum scopimerae sp. nov. is proposed.
The type strain is I-15T (=KCTC 32459T =JCM 19486T). |