| Title | Lysobacter panacihumi sp. nov., isolated from ginseng cultivated soil |
|---|---|
| Author | Yue Huo1,2, Jong-Pyo Kang1, Joon Hurh3, Yaxi Han1, Jong-Chan Ahn3, Ramya Mathiyalagan3, Chunhong Piao2, and Deok-Chun Yang1,3* |
| Address | 1Department of Oriental Medicinal Biotechnology, Kyung Hee University, Yongin 17104, Republic of Korea, 2College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, P. R. China, 3Graduate School of Biotechnology, College of Life Sciences, Kyung Hee University, Yongin 17104, Republic of Korea |
| Bibliography | Journal of Microbiology, 56(10),748–752, 2018, |
| DOI | 10.1007/s12275-018-8202-4 |
| Key Words | Lysobacter panacihumi, ginseng cultivated soil, 16S rRNA gene |
| Abstract | A Gram-negative, non-motile, aerobic, catalase-, and oxidasepositive bacterial strain, designated DCY117T, was isolated from ginseng cultivated soil in Gochang-gun, Republic of Korea, and was characterized taxonomically using a multifaceted approach. 16S rRNA gene sequence analysis revealed that strain DCY117T showed highest similarity to Lysobacter ruishenii CTN-1T (95.3%). Phylogenetic analysis revealed that closely related relatives of strain DCY117T were L. aestuarii S2-CT (95.1%), L. daejeonensis GH1-9T (95.0%), and L. caeni BUT-8T (94.9%). Diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), and phosphatidylethanolamine (PE) were the major polar lipids of strain DCY117T. The major isoprenoid quinone was Q-8. The major cellular fatty acids of strain DCY117T were iso-C15:0, iso-C16:0, and summed feature 9 (comprising iso-C17:1 ω9c and/or 10-methyl-C16:0). Genomic DNA G + C content was 61.8 mol%. On the basis of our findings, strain DCY117T is a novel species in the genus Lysobacter. We propose the name Lysobacter panacihumi sp. nov., and the type strain is DCY117T (= KCTC 62019T = JCM 32168T). |