Title |
Note-GA] Genome sequence of Caballeronia sordidicola strain PAMC 26510 isolated from Psoroma sp., an Antarctic lichen |
Author |
Jhung Ahn Yang1, Soon Gyu Hong2, and Hyun-Myung Oh1* |
Address |
1Department of Marine-Bio Convergence Science, Specialized Graduate School Science & Technology Convergence, Pukyong National University, Busan 48547, Republic of Korea, 2Division of Polar Life Sciences, Korea Polar Research Institute, Incheon 21990, Republic of Korea |
Bibliography |
Korean Journal of Microbiology, 53(2),137-140, 2017 |
DOI |
https://doi.org/10.7845/kjm.2017.7033
|
Key Words |
Caballeronia sordidicola, Psoroma species, Antarctic,
lichen |
Abstract |
Caballeronia sordidicola strain PAMC 26510 was isolated
from Psoroma sp., a lichen material, collected from Barton
Peninsula of King George Island in Antarctica. The draft
genome sequence of PAMC 26510 consisted of 224 contigs
and they was 7,872,143 base pairs with 59.7% G+C content.
The genome included 7,580 protein coding sequences and 6
ribosomal RNA genes and 46 tRNA genes. The strain PAMC
26510 is also a metabolic generalist as we have observed in
previous genomic studies in the arctic strain of Caballeronia
sordidicola. The draft genomic sequences of PAMC 26510 had
six CRISPR arrays on six contigs, and there were two clusters
of CRISPR-associated genes that were linked with respective
CRISPR arrays. |
Download PDF |
53(2)_12_p.137-140.pdf |